BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A04SP1|AL428645
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1333 1731 0.0
>3x_Contig1333
Length = 6390
Score = 1731 bits (873), Expect = 0.0
Identities = 880/881 (99%), Gaps = 1/881 (0%)
Strand = Plus / Minus
Query: 1 aaattcggtaaggtagcagataaacctaagatacggatcatggtctgcgaactttctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 aaattcggtaaggtagcagataaacctaagatacggatcatggtctgcgaactttctacc 822
Query: 61 tgtcttaaagtacgtgccaccaaactttcaatgactgaccctctatcttcatgtaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tgtcttaaagtacgtgccaccaaactttcaatgactgaccctctatcttcatgtaataaa 762
Query: 121 tgaacttcgtctaaaattaataatttcacctttgaagtaaggtcattgtcaccacttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tgaacttcgtctaaaattaataatttcacctttgaagtaaggtcattgtcaccacttgct 702
Query: 181 ttacgtgtgaccacatcccatttttcaggtgttgtaacaatgacttgagtttcaagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ttacgtgtgaccacatcccatttttcaggtgttgtaacaatgacttgagtttcaagaatc 642
Query: 241 tctcgcttcgttagttgcatatcacctgtaagttcacgaaccttgacatcaaacacggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tctcgcttcgttagttgcatatcacctgtaagttcacgaaccttgacatcaaacacggat 582
Query: 301 agcttacgagcaaacttgtcagtgatttcagctgctaaagccttaagtggagccacgtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agcttacgagcaaacttgtcagtgatttcagctgctaaagccttaagtggagccacgtag 522
Query: 361 ataattttgaaatcatcatattcaatgtcaaacccgccttcttcatttatgacggagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ataattttgaaatcatcatattcaatgtcaaacccgccttcttcatttatgacggagaat 462
Query: 421 tgtttgattgtatttaatatagtcaataaagcaatatcggttttacctgcaccagttgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgtttgattgtatttaatatagtcaataaagcaatatcggttttacctgcaccagttgga 402
Query: 481 gcgcagatcaacatgttaccatttgtattgtacgctaccgggtaaaccaaggactgtacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gcgcagatcaacatgttaccatttgtattgtacgctaccgggtaaaccaaggactgtacc 342
Query: 541 ttattcaaataatcatactcgaatactttacggcagtattcatccaaatcactgactttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttattcaaataatcatactcgaatactttacggcagtattcatccaaatcactgactttg 282
Query: 601 accaatggaatatcgaattttcttttcggtacagcgcatggaattgttatctcttcatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 accaatggaatatcgaattttcttttcggtacagcgcatggaattgttatctcttcatgt 222
Query: 661 gtttggaaagtatatctcatgcttccagctggtaatgcaaatttttgacctgcaaaagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtttggaaagtatatctcatgcttccagctggtaatgcaaatttttgacctgcaaaagaa 162
Query: 721 agcattgacgatccagcatcctccgactgtctaaagacatgtggatactttacttttctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 agcattgacgatccagcatcctccgactgtctaaagacatgtggatactttacttttctt 102
Query: 781 tgtgcagtagccaatttagcgtttttacctttttccctattcttgaggacttgtcttctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tgtgcagtagccaatttagcgtttttacctttttccctattcttgaggacttgtcttctc 42
Query: 841 atgtcctcttcggtcatgaa-tcggtttccctcgtaagtat 880
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 41 atgtcctcttcggtcatgaattcggtttccctcgtaagtat 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6611
Number of Sequences: 1807
Number of extensions: 6611
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)